PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT2G17770.2
Common NameATBZIP27, BZIP27, FDP, T17A5.15
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 195aa    MW: 22007.9 Da    PI: 9.7223
Description basic region/leucine zipper motif 27
Gene Model
Gene Model ID Type Source Coding Sequence
AT2G17770.2genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.32.3e-15125174453
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  ++r +r++kNRe+A rsR+RK+a++ eLe +++ L++eN +Lk + e+lk
  AT2G17770.2 125 DRRYKRMIKNRESAARSRARKQAYTNELELEIAHLQTENARLKIQQEQLK 174
                  7899***************************************9999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-11122186IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978124174IPR004827Basic-leucine zipper domain
PfamPF001706.0E-13125174IPR004827Basic-leucine zipper domain
CDDcd147072.45E-26126180No hitNo description
SuperFamilySSF579592.25E-11126174No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-13126174No hitNo description
PROSITE patternPS000360129144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0009009anatomyplant embryo
PO:0009010anatomyseed
PO:0009046anatomyflower
PO:0025022anatomycollective leaf structure
PO:0001078developmental stageplant embryo cotyledonary stage
PO:0001081developmental stagemature plant embryo stage
PO:0004507developmental stageplant embryo bilateral stage
PO:0007611developmental stagepetal differentiation and expansion stage
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI  60
VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR SFEESAKFGC LGKKRGQDSD  120
DTRGDRRYKR MIKNRESAAR SRARKQAYTN ELELEIAHLQ TENARLKIQQ EQLKIAEATQ  180
NQVKKTLQRS STAPF
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible264620_at0.0
Expression AtlasAT2G17770-
AtGenExpressAT2G17770-
ATTED-IIAT2G17770-
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed on the flanks of the shoot apex. {ECO:0000269|PubMed:23543784}.
Functional Description ? help Back to Top
Source Description
TAIREncodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT.
UniProtTranscription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:23543784}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT2G17770.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Interaction ? help Back to Top
Source Intact With
BioGRIDAT2G17770, AT4G35900
IntActSearch Q7PCC6
Phenotype -- Disruption Phenotype ? help Back to Top
Source Description
UniProtDISRUPTION PHENOTYPE: Slightly delayed flowering. In the plants missing both FD and FDP, fd-2 fdp-1 strongly delayed flowering, even in the presence of high FT levels. {ECO:0000269|PubMed:23543784}.
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT2G17770
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY5003420.0AY500342.1 Arabidopsis thaliana At2g17770 mRNA, partial sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001189545.11e-144bZIP transcription factor FD-like protein
SwissprotQ7PCC61e-146FDP_ARATH; bZIP transcription factor 27
TrEMBLD7LAA91e-103D7LAA9_ARALL; Putative uncharacterized protein
STRINGAT2G17770.21e-143(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Representative plantOGRP8739610
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Jakoby M, et al.
    bZIP transcription factors in Arabidopsis.
    Trends Plant Sci., 2002. 7(3): p. 106-11
    [PMID:11906833]
  3. Bensmihen S, et al.
    The homologous ABI5 and EEL transcription factors function antagonistically to fine-tune gene expression during late embryogenesis.
    Plant Cell, 2002. 14(6): p. 1391-403
    [PMID:12084834]
  4. Abe M, et al.
    FD, a bZIP protein mediating signals from the floral pathway integrator FT at the shoot apex.
    Science, 2005. 309(5737): p. 1052-6
    [PMID:16099979]
  5. Wigge PA, et al.
    Integration of spatial and temporal information during floral induction in Arabidopsis.
    Science, 2005. 309(5737): p. 1056-9
    [PMID:16099980]
  6. Ikeda Y,Kobayashi Y,Yamaguchi A,Abe M,Araki T
    Molecular basis of late-flowering phenotype caused by dominant epi-alleles of the FWA locus in Arabidopsis.
    Plant Cell Physiol., 2007. 48(2): p. 205-20
    [PMID:17189287]
  7. Libault M,Wan J,Czechowski T,Udvardi M,Stacey G
    Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.
    Mol. Plant Microbe Interact., 2007. 20(8): p. 900-11
    [PMID:17722694]
  8. Jang S,Torti S,Coupland G
    Genetic and spatial interactions between FT, TSF and SVP during the early stages of floral induction in Arabidopsis.
    Plant J., 2009. 60(4): p. 614-25
    [PMID:19656342]
  9. Arabidopsis Interactome Mapping Consortium
    Evidence for network evolution in an Arabidopsis interactome map.
    Science, 2011. 333(6042): p. 601-7
    [PMID:21798944]
  10. Jaeger KE,Pullen N,Lamzin S,Morris RJ,Wigge PA
    Interlocking feedback loops govern the dynamic behavior of the floral transition in Arabidopsis.
    Plant Cell, 2013. 25(3): p. 820-33
    [PMID:23543784]